Toggle diff (480 lines)
diff --git a/gnu/packages/coq.scm b/gnu/packages/coq.scm
new file mode 100644
index 000000000..3a898814c
--- /dev/null
+++ b/gnu/packages/coq.scm
@@ -0,0 +1,454 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages coq)
+ #:use-module (gnu packages)
+ #:use-module (gnu packages base)
+ #:use-module (gnu packages bison)
+ #:use-module (gnu packages boost)
+ #:use-module (gnu packages emacs)
+ #:use-module (gnu packages flex)
+ #:use-module (gnu packages multiprecision)
+ #:use-module (gnu packages ocaml)
+ #:use-module (gnu packages perl)
+ #:use-module (gnu packages python)
+ #:use-module (gnu packages texinfo)
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system ocaml)
+ #:use-module (guix download)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix packages)
+ #:use-module (guix utils)
+ #:use-module ((srfi srfi-1) #:hide (zip)))
+
+(define-public coq
+ (package
+ (name "coq")
+ (version "8.8.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/coq/coq/archive/V"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0i2hs0i6rp27cy8zd0mx7jscqw5cx2y0diw0pxgij66s3yr47y7r"))))
+ (native-search-paths
+ (list (search-path-specification
+ (variable "COQPATH")
+ (files (list "lib/coq/user-contrib")))))
+ (build-system ocaml-build-system)
+ (inputs
+ `(("lablgtk" ,lablgtk)
+ ("python" ,python-2)
+ ("camlp5" ,camlp5)
+ ("ocaml-num" ,ocaml-num)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (mandir (string-append out "/share/man"))
+ (browser "icecat -remote \"OpenURL(%s,new-tab)\""))
+ (invoke "./configure"
+ "-prefix" out
+ "-mandir" mandir
+ "-browser" browser
+ "-coqide" "opt"))))
+ (replace 'build
+ (lambda _
+ (invoke "make"
+ "-j" (number->string (parallel-job-count))
+ "world")))
+ (delete 'check)
+ (add-after 'install 'check
+ (lambda _
+ (with-directory-excursion "test-suite"
+ ;; These two tests fail.
+ ;; This one fails because the output is not formatted as expected.
+ (delete-file-recursively "coq-makefile/timing")
+ ;; This one fails because we didn't build coqtop.byte.
+ (delete-file-recursively "coq-makefile/findlib-package")
+ (invoke "make")))))))
+ (home-page "https://coq.inria.fr")
+ (synopsis "Proof assistant for higher-order logic")
+ (description
+ "Coq is a proof assistant for higher-order logic, which allows the
+development of computer programs consistent with their formal specification.
+It is developed using Objective Caml and Camlp5.")
+ ;; The code is distributed under lgpl2.1.
+ ;; Some of the documentation is distributed under opl1.0+.
+ (license (list license:lgpl2.1 license:opl1.0+))))
+
+(define-public proof-general
+ (package
+ (name "proof-general")
+ (version "4.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "http://proofgeneral.inf.ed.ac.uk/releases/"
+ "ProofGeneral-" version ".tgz"))
+ (sha256
+ (base32
+ "09qb0myq66fw17v4ziz401ilsb5xlxz1nl2wsp69d0vrfy0bcrrm"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("which" ,which)
+ ("emacs" ,emacs-minimal)
+ ("texinfo" ,texinfo)))
+ (inputs
+ `(("host-emacs" ,emacs)
+ ("perl" ,perl)
+ ("coq" ,coq)))
+ (arguments
+ `(#:tests? #f ; no check target
+ #:make-flags (list (string-append "PREFIX=" %output)
+ (string-append "DEST_PREFIX=" %output))
+ #:modules ((guix build gnu-build-system)
+ (guix build utils)
+ (guix build emacs-utils))
+ #:imported-modules (,@%gnu-build-system-modules
+ (guix build emacs-utils))
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-after 'unpack 'disable-byte-compile-error-on-warn
+ (lambda _
+ (substitute* "Makefile"
+ (("\\(setq byte-compile-error-on-warn t\\)")
+ "(setq byte-compile-error-on-warn nil)"))
+ #t))
+ (add-after 'unpack 'patch-hardcoded-paths
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out"))
+ (coq (assoc-ref inputs "coq"))
+ (emacs (assoc-ref inputs "host-emacs")))
+ (define (coq-prog name)
+ (string-append coq "/bin/" name))
+ (emacs-substitute-variables "coq/coq.el"
+ ("coq-prog-name" (coq-prog "coqtop"))
+ ("coq-compiler" (coq-prog "coqc"))
+ ("coq-dependency-analyzer" (coq-prog "coqdep")))
+ (substitute* "Makefile"
+ (("/sbin/install-info") "install-info"))
+ (substitute* "bin/proofgeneral"
+ (("^PGHOMEDEFAULT=.*" all)
+ (string-append all
+ "PGHOME=$PGHOMEDEFAULT\n"
+ "EMACS=" emacs "/bin/emacs")))
+ #t)))
+ (add-after 'unpack 'clean
+ (lambda _
+ ;; Delete the pre-compiled elc files for Emacs 23.
+ (zero? (system* "make" "clean"))))
+ (add-after 'install 'install-doc
+ (lambda* (#:key make-flags #:allow-other-keys)
+ ;; XXX FIXME avoid building/installing pdf files,
+ ;; due to unresolved errors building them.
+ (substitute* "Makefile"
+ ((" [^ ]*\\.pdf") ""))
+ (zero? (apply system* "make" "install-doc"
+ make-flags)))))))
+ (home-page "http://proofgeneral.inf.ed.ac.uk/")
+ (synopsis "Generic front-end for proof assistants based on Emacs")
+ (description
+ "Proof General is a major mode to turn Emacs into an interactive proof
+assistant to write formal mathematical proofs using a variety of theorem
+provers.")
+ (license license:gpl2+)))
+
+(define-public coq-flocq
+ (package
+ (name "coq-flocq")
+ (version "2.6.1")
+ (source (origin
+ (method url-fetch)
+ ;; Use the ‘Latest version’ link for a stable URI across releases.
+ (uri (string-append "https://gforge.inria.fr/frs/download.php/"
+ "file/37454/flocq-" version ".tar.gz"))
+ (sha256
+ (base32
+ "06msp1fwpqv6p98a3i1nnkj7ch9rcq3rm916yxq8dxf51lkghrin"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("ocaml" ,ocaml)
+ ("which" ,which)
+ ("coq" ,coq)))
+ (arguments
+ `(#:configure-flags
+ (list (string-append "--libdir=" (assoc-ref %outputs "out")
+ "/lib/coq/user-contrib/Flocq"))
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'fix-remake
+ (lambda _
+ (substitute* "remake.cpp"
+ (("/bin/sh") (which "sh")))
+ #t))
+ (replace 'build
+ (lambda _
+ (invoke "./remake")
+ #t))
+ (replace 'check
+ (lambda _
+ (invoke "./remake" "check")
+ #t))
+ ;; TODO: requires coq-gappa and coq-interval.
+ ;(invoke "./remake" "check-more")
+ (replace 'install
+ (lambda _
+ (invoke "./remake" "install")
+ #t)))))
+ (home-page "http://flocq.gforge.inria.fr/")
+ (synopsis "Floating-point formalization for the Coq system")
+ (description "Flocq (Floats for Coq) is a floating-point formalization for
+the Coq system. It provides a comprehensive library of theorems on a multi-radix
+multi-precision arithmetic. It also supports efficient numerical computations
+inside Coq.")
+ (license license:lgpl3+)))
+
+(define-public coq-gappa
+ (package
+ (name "coq-gappa")
+ (version "1.3.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://gforge.inria.fr/frs/download.php/file/36397/gappa-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "19kg2zldaqs4smy7bv9hp650sqg46xbx1ss7jnyagpxdscwn9apd"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("ocaml" ,ocaml)
+ ("which" ,which)
+ ("coq" ,coq)
+ ("bison" ,bison)
+ ("flex" ,flex)))
+ (inputs
+ `(("gmp" ,gmp)
+ ("mpfr" ,mpfr)
+ ("boost" ,boost)))
+ (arguments
+ `(#:configure-flags
+ (list (string-append "--libdir=" (assoc-ref %outputs "out")
+ "/lib/coq/user-contrib/Gappa"))
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'fix-remake
+ (lambda _
+ (substitute* "remake.cpp"
+ (("/bin/sh") (which "sh")))))
+ (replace 'build
+ (lambda _
+ (zero? (system* "./remake"))))
+ (replace 'check
+ (lambda _
+ (zero? (system* "./remake" "check"))))
+ (replace 'install
+ (lambda _
+ (zero? (system* "./remake" "install")))))))
+ (home-page "http://gappa.gforge.inria.fr/")
+ (synopsis "Verify and formally prove properties on numerical programs")
+ (description "Gappa is a tool intended to help verifying and formally proving
+properties on numerical programs dealing with floating-point or fixed-point
+arithmetic. It has been used to write robust floating-point filters for CGAL
+and it is used to certify elementary functions in CRlibm. While Gappa is
+intended to be used directly, it can also act as a backend prover for the Why3
+software verification plateform or as an automatic tactic for the Coq proof
+assistant.")
+ (license (list license:gpl2+ license:cecill))));either gpl2+ or cecill
+
+(define-public coq-mathcomp
+ (package
+ (name "coq-mathcomp")
+ (version "1.7.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/math-comp/math-comp/archive/mathcomp-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "05zgyi4wmasi1rcyn5jq42w0bi9713q9m8dl1fdgl66nmacixh39"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("ocaml" ,ocaml)
+ ("which" ,which)
+ ("coq" ,coq)))
+ (arguments
+ `(#:tests? #f; No need to test formally-verified programs :)
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-before 'build 'chdir
+ (lambda _
+ (chdir "mathcomp")))
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (setenv "COQLIB" (string-append (assoc-ref outputs "out") "/lib/coq/"))
+ (zero? (system* "make" "-f" "Makefile.coq"
+ (string-append "COQLIB=" (assoc-ref outputs "out")
+ "/lib/coq/")
+ "install")))))))
+ (home-page "https://math-comp.github.io/math-comp/")
+ (synopsis "Mathematical Components for Coq")
+ (description "Mathematical Components for Coq has its origins in the formal
+proof of the Four Colour Theorem. Since then it has grown to cover many areas
+of mathematics and has been used for large scale projects like the formal proof
+of the Odd Order Theorem.
+
+The library is written using the Ssreflect proof language that is an integral
+part of the distribution.")
+ (license license:cecill-b)))
+
+(define-public coq-coquelicot
+ (package
+ (name "coq-coquelicot")
+ (version "3.0.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://gforge.inria.fr/frs/download.php/"
+ "file/37045/coquelicot-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0hsyhsy2lwqxxx2r8xgi5csmirss42lp9bkb9yy35mnya0w78c8r"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("ocaml" ,ocaml)
+ ("which" ,which)
+ ("coq" ,coq)))
+ (propagated-inputs
+ `(("mathcomp" ,coq-mathcomp)))
+ (arguments
+ `(#:configure-flags
+ (list (string-append "--libdir=" (assoc-ref %outputs "out")
+ "/lib/coq/user-contrib/Coquelicot"))
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'fix-coq8.8
+ (lambda _
+ ; appcontext has been removed from coq 8.8
+ (substitute* "theories/AutoDerive.v"
+ (("appcontext") "context"))
+ #t))
+ (add-before 'configure 'fix-remake
+ (lambda _
+ (substitute* "remake.cpp"
+ (("/bin/sh") (which "sh")))))
+ (replace 'build
+ (lambda _
+ (zero? (system* "./remake"))))
+ (replace 'check
+ (lambda _
+ (zero? (system* "./remake" "check"))))
+ (replace 'install
+ (lambda _
+ (zero? (system* "./remake" "install")))))))
+ (home-page "http://coquelicot.saclay.inria.fr/index.html")
+ (synopsis "Coq library for Reals")
+ (description "Coquelicot is an easier way of writing formulas and theorem
+statements, achieved by relying on total functions in place of dependent types
+for limits, derivatives, integrals, power series, and so on. To help with the
+proof process, the library comes with a comprehensive set of theorems that cover
+not only these notions, but also some extensions such as parametric integrals,
+two-dimensional differentiability, asymptotic behaviors. It also offers some
+automations for performing differentiability proofs. Moreover, Coquelicot is a
+conservative extension of Coq's standard library and provides correspondence
+theorems between the two libraries.")
+ (license license:lgpl3+)))
+
+(define-public coq-bignums
+ (package
+ (name "coq-bignums")
+ (version "8.8.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/coq/bignums/archive/V"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "08m1cmq4hkaf4sb0vy978c11rgzvds71cphyadmr2iirpr5815r0"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("ocaml" ,ocaml)
+ ("coq" ,coq)))
+ (inputs
+ `(("camlp5" ,camlp5)))
+ (arguments
+ `(#:tests? #f; No test target
+ #:make-flags
+ (list (string-append "COQLIBINSTALL=" (assoc-ref %outputs "out")
+ "/lib/coq/user-contrib"))
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure))))
+ (home-page "https://github.com/coq/bignums")
+ (synopsis "Coq library for arbitrary large numbers")
+ (description "Bignums is a coq library of arbitrary large numbers. It
+provides BigN, BigZ, BigQ that used to be part of Coq standard library.")
+ (license license:lgpl2.1+)))
+
+(define-public coq-interval
+ (package
+ (name "coq-interval")
+ (version "3.3.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://gforge.inria.fr/frs/download.php/"
+ "file/37077/interval-" version ".tar.gz"))
+ (sha256
+ (base32
+ "08fdcf3hbwqphglvwprvqzgkg0qbimpyhnqsgv3gac4y1ap0f903"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("ocaml" ,ocaml)
+ ("which" ,which)
+ ("coq" ,coq)))
+ (propagated-inputs
+ `(("flocq" ,coq-flocq)
+ ("bignums" ,coq-bignums)
+ ("coquelicot" ,coq-coquelicot)
+ ("mathcomp" ,coq-mathcomp)))
+ (arguments
+ `(#:configure-flags
+ (list (string-append "--libdir=" (assoc-ref %outputs "out")
+ "/lib/coq/user-contrib/Gappa"))
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'fix-remake
+ (lambda _
+ (substitute* "remake.cpp"
+ (("/bin/sh") (which "sh")))))
+ (replace 'build
+ (lambda _
+ (zero? (system* "./remake"))))
+ (replace 'check
+ (lambda _
+ (zero? (system* "./remake" "check"))))
+ (replace 'install
+ (lambda _
+ (zero? (system* "./remake" "install")))))))
+ (home-page "http://coq-interval.gforge.inria.fr/")
+ (synopsis "Coq tactics to simplify inequality proofs")
+ (description "Interval provides vernacular files containing tactics for
+simplifying the proofs of inequalities on expressions of real numbers for the
+Coq proof assistant.")
+ (license license:cecill-c)))
diff --git a/gnu/packages/ocaml.scm b/gnu/packages/ocaml.scm
index 3b1ddcb5b..503e42297 100644
--- a/gnu/packages/ocaml.scm
+++ b/gnu/packages/ocaml.scm
@@ -632,144 +632,6 @@ arbitrary-precision integer and rational arithmetic that used to be part of
the OCaml core distribution.")
(license license:lgpl2.1+))); with linking exception
-(define-public coq
- (package
- (name "coq")
- (version "8.8.2")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/coq/coq/archive/V"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "0i2hs0i6rp27cy8z
